[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 488 items for (author: chen & dd)

EMDB-43647:
CryoEM structure of Gi-coupled TAS2R14 with cholesterol and an intracellular tastant
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-43650:
CryoEM structure of Ggust-coupled TAS2R14 with cholesterol and an intracellular tastant
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-43656:
CryoEM structure of Gi-coupled TAS2R14 with cholesterol and an intracellular tastant (Locally refined map)
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-43657:
CryoEM structure of Ggust-coupled TAS2R14 with cholesterol and an intracellular tastant (Locally refined map)
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-38795:
Cryo-EM structure of the [Pyr1]-apelin-13-bound human APLNR-Gi complex
Method: single particle / : Wang W, Ji S, Zhang Y

EMDB-38794:
Cryo-EM structure of the WN561-bound human APLNR-Gi complex
Method: single particle / : Wang W, Ji S, Zhang Y

EMDB-38796:
Cryo-EM structure of the MM07-bound human APLNR-Gi complex
Method: single particle / : Wang W, Ji S, Zhang Y

EMDB-38797:
Cryo-EM structure of the CMF-019-bound human APLNR-Gi complex
Method: single particle / : Wang W, Ji S, Zhang Y

EMDB-38798:
Cryo-EM structure of the WN353-bound human APLNR-Gi complex
Method: single particle / : Wang W, Ji S, Zhang Y

EMDB-37390:
Cryo-EM structure of peptide free and Gs-coupled GIPR
Method: single particle / : Cong ZT, Zhao FH, Li Y, Luo G, Zhou QT, Yang DH, Wang MW, Dai AT, Shen DD, Zhang Y, Xia T, Stevens RC, Xu HE, Zhao LH

EMDB-35514:
Cryo-EM structure of the inactive CD97
Method: single particle / : Mao C, Zhao R, Dong Y, Gao M, Chen L, Zhang C, Xiao P, Guo J, Qin J, Shen D, Ji S, Zang S, Zhang H, Wang W, Shen Q, Sun P, Zhang Y

EMDB-38938:
Cryo-EM structure of the inactive CD97
Method: single particle / : Mao C, Zhao R, Dong Y, Gao M, Chen L, Zhang C, Xiao P, Guo J, Qin J, Shen D, Ji S, Zang S, Zhang H, Wang W, Shen Q, Sun P, Zhang Y

EMDB-38939:
Cryo-EM structure of the inactive CD97
Method: single particle / : Mao C, Zhao R, Dong Y, Gao M, Chen L, Zhang C, Xiao P, Guo J, Qin J, Shen D, Ji S, Zang S, Zhang H, Wang W, Shen Q, Sun P, Zhang Y

EMDB-38980:
Cryo-EM structure of the inactive CD97
Method: single particle / : Mao C, Zhao R, Dong Y, Gao M, Chen L, Zhang C, Xiao P, Guo J, Qin J, Shen D, Ji S, Zang S, Zhang H, Wang W, Shen Q, Sun J, Zhang Y

EMDB-35516:
Cryo-EM structure of the CD97-G13 complex
Method: single particle / : Mao C, Zhao R, Dong Y, Gao M, Chen L, Zhang C, Xiao P

EMDB-40856:
Single particle reconstruction of the human LINE-1 ORF2p without substrate (apo)
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-40858:
Structure of LINE-1 ORF2p with template:primer hybrid
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-40859:
Structure of LINE-1 ORF2p with an oligo(A) template
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

PDB-8sxt:
Structure of LINE-1 ORF2p with template:primer hybrid
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

PDB-8sxu:
Structure of LINE-1 ORF2p with an oligo(A) template
Method: single particle / : van Eeuwen T, Taylor MS, Rout MP

EMDB-41048:
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
Method: single particle / : Gorman J, Kwong PD

PDB-8t5c:
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
Method: single particle / : Gorman J, Kwong PD

EMDB-40711:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH, Center for Structural Genomics of Infectious Diseases (CSGID)

PDB-8sqn:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor
Method: single particle / : Zimmerman MI, Fremont DH, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-36010:
Cryo-EM structure of the MK-6892-bound human HCAR2-Gi1 complex
Method: single particle / : Mao C, Gao M, Zang S, Zhu Y, Ma X, Zhang Y

EMDB-36011:
Cryo-EM structure of the 3-HB and compound 9n-bound human HCAR2-Gi1 complex
Method: single particle / : Mao C, Gao M, Zang S, Zhu Y, Ma X, Zhang Y

EMDB-36012:
Cryo-EM structure of the MK-6892-bound human HCAR2-Gi1 complex
Method: single particle / : Mao C, Gao M, Zang S, Zhu Y, Ma X, Zhang Y

EMDB-35297:
Structural insights into human brain gut peptide cholecystokinin receptors
Method: single particle / : Ding Y, Zhang H, Liao Y, Chen L, Ji S

EMDB-40884:
Human VPS29/VPS35L Complex (Locally refined map)
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

EMDB-40885:
Human VPS35L/VPS29/VPS26C Complex
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

EMDB-40886:
Human Retriever VPS35L/VPS29/VPS26C Complex (Composite Map)
Method: single particle / : Chen Z, Chen B, Burstein E, Han Y

EMDB-36855:
S. cerevisiae Chs1 in complex with polyoxin B
Method: single particle / : Bai L, Chen DD

EMDB-36856:
S. cerevisiae Chs1 in apo state
Method: single particle / : Bai L, Chen D

EMDB-36859:
S. cerevisiae Chs1 in complex with UDP
Method: single particle / : Bai L, Chen D

EMDB-36862:
S. cerevisiae Chs1 in complex with UDP-GlcNAc
Method: single particle / : Bai L, Chen D

EMDB-36863:
S. cerevisiae Chs1 in complex with UDP-GlcNAc and GlcNAc
Method: single particle / : Bai L, Chen D

EMDB-36864:
S. cerevisiae Chs1 in complex with Nikkomycin Z
Method: single particle / : Bai L, Chen D

EMDB-26583:
Cryo-EM structure of Antibody 12-16 in complex with prefusion SARS-CoV-2 Spike glycoprotein
Method: single particle / : Casner RG, Shapiro L

PDB-7ukl:
Cryo-EM structure of Antibody 12-16 in complex with prefusion SARS-CoV-2 Spike glycoprotein
Method: single particle / : Casner RG, Shapiro L

EMDB-36748:
Structure of a fungal 1,3-beta-glucan synthase
Method: single particle / : Zhao C, You Z, Chen D, Hang J, Wang Z, Meng J, Wang L, Zhao P, Qiao J, Yun C, Bai L

EMDB-29530:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-29531:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-40240:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8fxb:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8fxc:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8s9g:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-28115:
Western Equine Encephalitis Virus-Like Particle in Complex with SKW19 Fab
Method: single particle / : Pletnev S, Tsybovsky Y, Verardi R, Roedeger M, Kwong P

EMDB-28116:
Western Equine Encephalitis Virus-Like Particle in Complex with SKW24 Fab
Method: single particle / : Pletnev S, Tsybovsky Y, Verardi R, Roedeger M, Kwong PD

EMDB-28117:
Eastern Equine Encephalitis Virus-Like Particle in Complex with SKE26 Fab
Method: single particle / : Pletnev S, Verardi R, Roedeger M, Kwong P

EMDB-17369:
A CHIMERA construct containing human SARM1 ARM and SAM domains and C. elegans TIR domain.
Method: single particle / : Isupov MN, Opatowsky Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more